Events / Single Cell & Spatial Transcriptomics Analysis Course at CSHL

Single Cell & Spatial Transcriptomics Analysis Course at CSHL

From June 26, 2025 to July 14, 2025
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Single Cell & Spatial Transcriptomics Analysis Course at Cold Spring Harbor Laboratory

June 26 – July 14, 2025

Location: Cold Spring Harbor Laboratory, NY
Application Deadline: March 15th, 2025
Learn more and apply at https://meetings.cshl.edu/courses.aspx?course=C-SINGLE
Cost (including board and lodging): $5,555 USD
Consider applying for a CQB Travel Award to cover up to $1200 of the cost

The goal of this two-week course is to teach students cutting-edge wet-lab approaches for single cell analysis, and to provide familiarity with basic bioinformatic approaches to single cell data. Modules of the course will be taught by scientists with expertise in distinct areas of single cell analysis.

Topics:

  • Droplet-based single cell RNA-seq using RNA Flex Technology.
  • Single cell Imaging using Single cell Transcriptomics And Multimodal Profiling though imaging (STAMP) using Xenium Technology.
  • Spatial Transcriptomics of tissues using Visium HD
  • Single-Cell Western blot
  • Single-Cell Mass Spectrometry
  • Photoactivatable probes
  • Introduction to Bioinformatics (R/Python)
  • Single-Cell and Spatial Transcriptomics Bioinformatics
  • and more